Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949998.1_cds_XP_016490653.1_81057
CDS Infomation

[gene=LOC107810391] [db_xref=GeneID:107810391] [protein=girdin-like] [protein_id=XP_016490653.1] [location=join(3675..3710,3790..3871,3951..3997,4075..4164,4255..4308,7244..7321,7414..7482,7563..7718,7795..7921,9236..9276,9678..9767,9848..9952,11725..11901,12244..12353,12461..12536)] [gbkey=CDS]
Sequence

ATGGACTATCGCCACGCCTCCCTTGCCCGTCGAACGTTGGAAGAAATTCGTCAAAAGAGA
GCAGCAGAGAGATTAAGCAAAATCTCTTCTGGACCCGATCTTACCAATATCCCTAATGAG
GTTGTGGGGATTAAAAGATCCGAGAGTACAACTCGACTATCAGAGAATGATATGAGTGGT
TTAGTTTCTCAATTGAAACAAGTGCAAAAAAATAATGCAGAGCTGGATGAAGCAAATAGA
GCACTGGCCTCAAGGCTTCAGACAAAAGAAGCCGAGAACAACATGTTGCAAAAGCGTCTT
AATGATCTGGAGCAAAACACTGTAGCTTCATTAAGAAAAGCACTCAAGGATGTTGCCATG
GAAAAGGATGCAGCAGTTGTTGCACGAGAGGATCTTTCAGCTCAGCTTCGTGCAATTAAG
AAACGTGTGAAGGAAGTAGAAGAGGAACAATATCGGGCTGAAGAGGATGCAGCAGCGCTA
AGAGCAGAACTTAACTCATTACAGCAGCAAGCAATGTCCGGTCCTGTTAGTGGTGTAAAT
TCAATGAATTTTCCGCTAGATCATATGCATGTTATGGAGAAGGAGCTGGCAAATCTCAAA
TCTCAATTAGAGCAAATGACCCTGTTGAGGCAACAAGAAAGACAGCAGTTAGTGGAGGAG
CAAGCGCGCATATCTACACTAACTTCTCAAAAGCAGGATTTGGAAGAGAAGCTTGCTGTT
ATGTCCAATAAGGTCTCAGATGAAGTCACCGGAAAGGCATCCCAGAAGACATTCTCGGGG
GAAGACAAGGTGAGGCTTGAAAAGCAATTACATGATATGGCTGTGGCCATTGAAAGATTG
GAAAGTAGCCGGCAGAAACTTCTAATGGAGATTGATTCACAATCCTCGGAGATAGAGAGG
CTATTTGAGGAAAATTACAATCTGTCGTCCGCTCATCAAGAAGCTCTAGGGGTGGCCGTG
CAGTGGGAGAATCAGGTCAAAGATTGTCTCAAGCAAAATGAGGAGCTTCGTGCCATATTA
GATAAGTTGAGGACAGACCAAGCTGCAATAGCAACTGCAAACAACCTAATCCAGGAAGGC
GTTTCAGGATCCATCAAAGGCAGCAAAAATGAATTTCAAGGCACACAATATGCTGAAATC
CTCTCCATCAAGGGTCAGCTAGCTAAAGAGCAGAGCAAAGCAGAAGCACTATCTGCTGAA
ATCTTGCAGCTCAATGCACGGCTCCAGCAGGCCACGCAAGCATACAATAGTCTCACTCGC
ATCTATACACCTGTTCTAAGGAACATCGAGAACAGTCTCGTGACGTTGAAGCAAGATGGC
TCGGTTAGAGTCCTGTAA

Peptide Sequence

PEP ID

XP_016490653.1
PEP Infomation

PREDICTED: girdin-like [Nicotiana tabacum]
Sequence

MDYRHASLARRTLEEIRQKRAAERLSKISSGPDLTNIPNEVVGIKRSESTTRLSENDMSG
LVSQLKQVQKNNAELDEANRALASRLQTKEAENNMLQKRLNDLEQNTVASLRKALKDVAM
EKDAAVVAREDLSAQLRAIKKRVKEVEEEQYRAEEDAAALRAELNSLQQQAMSGPVSGVN
SMNFPLDHMHVMEKELANLKSQLEQMTLLRQQERQQLVEEQARISTLTSQKQDLEEKLAV
MSNKVSDEVTGKASQKTFSGEDKVRLEKQLHDMAVAIERLESSRQKLLMEIDSQSSEIER
LFEENYNLSSAHQEALGVAVQWENQVKDCLKQNEELRAILDKLRTDQAAIATANNLIQEG
VSGSIKGSKNEFQGTQYAEILSIKGQLAKEQSKAEALSAEILQLNARLQQATQAYNSLTR
IYTPVLRNIENSLVTLKQDGSVRVL

Transcript Sequence

Gene sequence data has not been registered.